Skip to content
Protolyst
  • Blog
  • Docs
  • Pricing
  • Login
  • GET STARTED

1. New to Protolyst

  • Citation styles: choose, build or import your own
  • 🚩Start Here
  • Create your First Page
  • Choosing a Page Type
  • Adding Information into your Workspace
  • Simple Work Flow: Capturing and Using Atoms
  • Workspace Layout
  • Capturing Atoms
  • Create a Table
  • Table Views
  • Organising Pages in your Workspace
  • Adding Citations & References to your Writing
  • Download and Export

2. Connecting your Workspace

  • Using Templates in Tables
  • How to Use Sub-Pages
  • How to Use Linked Pages
  • Connecting Atoms across your Workspace
  • Viewing and Organising Atoms in Tables
  • Atom Inheritance in your Workspace
  • How To Use Linked Tables
  • Create Pages From Atoms
  • Using Tags on Protolyst
  • Moving your Files and using Folders on Protolyst
  • Writing with your Atoms

Quick Tips

  • Renaming your Workspace
  • Workspace Keyboard Shortcuts
  • Copy-Pasting Pages
  • Searching your Workspace
  • Equations
  • Download and Export
  • Splitscreen
  • Checklists
  • Dark Mode

Protolyst for Research

  • Organising your Research Notes Efficiently on Protolyst
  • How to Write a Literature Review on Protolyst
  • Academic Reading on Protolyst – Quick Start Guide
  • How to Read a Research Paper
  • How to Build an Academic Reading System
  • Collecting and Organising Information from Research Papers

Protolyst for Notetaking

  • Customising your Pages
  • Adding Images to your Pages
  • Formatting your Notes
  • How to Research and Write an Article Fast on Protolyst
  • Note Taking on Protolyst
  • Simple First Zettelkasten on Protolyst
  • Technical Notetaking – Easily Add & Use Equations in your Notes
  • Cornell Notes for Notetaking on Protolyst

Protolyst for Organisation

  • Life Organisation with the PARA Method
  • Organising your To Dos on Protolyst
  • How to Write a Well Evidenced Essay, Fast
  • How to Manage Hiring & Recruitment on Protolyst
  • How to Write a Blog Post on Protolyst Using Your Atomic Knowledge Base

Protolyst Portals

  • Portals
  • Adding Content to Portals
  • Portal Set Up
  • Home
  • Docs
  • 1. New to Protolyst
  • Capturing Atoms
View Categories

Capturing Atoms

4 min read

0:00 / 4:26
  • View as Markdown Open this page as plain Markdown (opens in a new tab)
  • Open in ChatGPT Ask questions about this page (opens in a new tab)
  • Open in Claude Ask questions about this page (opens in a new tab)
  • Open in Google AI Studio Ask questions about this page (Google account required) (opens in a new tab)

Atoms are at the heart of Protolyst and workflows, opening up the possibilities of how you can work with your ideas, collate related concepts and connect facts to deepen your understanding.

What are Atoms? #

Atoms are the “aha” moments, quotes, or ideas that are worth remembering, connecting, and sharing. Capturing atoms allows you to extract and connect those aha moments throughout your workspace so you can quickly access the details needed to move your projects forward.

Saving information as an Atom, frees it from being located only within the source page. Adding Atoms into your workspace creates an additional knowledge layer in your workspace, and builds a collection of Atoms that you can access and use across your workspace. There’s more on Atoms in our blog

Why Atoms? #

Atoms are the building blocks of matter, and in Protolyst, the building blocks of knowledge. Atoms encompasses the analogy of small ideas that can be assembled together into new understanding, opinions and decisions. And so Atoms is the term we use encompassing your highlights, text snippets, and golden nuggets.

Capturing an Atom #

If you can highlight, then you can Capture an Atom!

As you are reading through your Sources and come across a key detail, highlight it and then choose Capture Atom. Once captured as an Atom, that snippet of text has been lifted out of the page and you’ll be able to view and access it across your workspace.

Highlight Text in your Pages and choose ‘Capture Atom’ to save it as an Atom in your workspace.

When you Capture an Atom in a Page, the Atom Box will appear. This box displays the text that has been saved as an Atom, and above the text box, there’s a coloured, encircled piece of Text. This is the Source Tag, and connects your Atom to it’s location in this Source Page.

The Source Tag allows you to easily and quickly get back to the original Source of your Atom, from anywhere else in your workspace. Click it to navigate back to the Source of your Atom.

Viewing your Atoms #

When you’ve captured an Atom, it is saved as an individual object in your workspace, so you’ll be able to see it outside of the Source Page.

There’s 3 ways to view your Atoms:

View all your Atoms #

View and search through all the Atoms in your workspace in All Pages search. Open this up at the top of your left hand sidebar, you’ll see a list of all your Pages and all your Atoms on the right. You can search through your collection of Pages and Atoms using the Search Bar at the top

All Pages gives you a searchable list of all the Pages and Atoms in your workspace

View Atoms in a Table with an Atoms Property #

If you have captured Atoms from a Page that is a Row in a Table, you can view your Atoms in the Atoms Property.

The Atoms Property displays Atoms for the Row (Page) in a Table

View Atoms in a Page in the Atoms Menu #

And you can view all the Atoms of a Page when you’re inside that Page by opening the Atoms Menu, to display a list of Atoms down the right side of your Page.

Using your Atoms #

Once captured your Atoms can be embedded into other Pages complete with automatic References and grouped together using Tags.

Using your Atoms to write #

Drag and drop Atoms into a Text Editor page to use them in your writing.

Use Splitscreen view to have a Page with your Atoms open and your new Page where you’ll be writing open side by side. To open a Page in Splitscreen use CTRL+Click.

Use Ctrl+Click to open 2 pages in splitscreen so you can view all the Atoms you’ve captured and use them to start writing.

Drag and drop the Atom into your Page. This will add the Atom text into your Page, alongside a Citation and a References Section will appear at the bottom of your Page.

Repeat for as many atoms as you want. The Atoms are editable in the Page to use in your writing.

Drag and drop an Atom into a Text Editor Page to add the Atom text into your Page. The first Atom will create a Citation and add a References section.

Grouping your Atoms together with Tags #

You can also use Tags to organise your Atoms to explore patterns and themes and group related Atoms together.

Top – adding a Tag to your Atom. Tags correspond to Pages in your workspace. Bottom – once a Tag has been added it displays next to the Source Tag in the row above the Atom box
What are your Feelings

Share This Article :

  • Facebook
  • X
  • LinkedIn
  • Pinterest
Still stuck? How can we help?

How can we help?

Updated on January 24, 2024
Workspace LayoutCreate a Table

Powered by BetterDocs

Table of Contents
  • What are Atoms?
  • Why Atoms?
  • Capturing an Atom
  • Viewing your Atoms
    • View all your Atoms
    • View Atoms in a Table with an Atoms Property
    • View Atoms in a Page in the Atoms Menu
  • Using your Atoms
    • Using your Atoms to write
    • Grouping your Atoms together with Tags
About

You're wasting 1 day a week refinding the golden nuggets of info buried in your files and folders. Protolyst is a networked note taking web app where you can collect and categorise each individual highlight to find and use your most valuable info fast.

Site
  • Docs
  • Blog
  • Pricing
  • Cookie Policy
  • Privacy Policy

Use For

  • Studying
  • Reading and annotating
  • Reading lists
  • Writing reports
  • Research
  • Teams
We use cookies to understand how people use our site so we can improve it. Analytics cookies are only set if you click “Accept All”.
Cookie SettingsReject AllAccept All
Manage consent

Privacy Overview

This website uses cookies to improve your experience while you navigate through the website. Out of these, the cookies that are categorized as necessary are stored on your browser as they are essential for the working of basic functionalities of the website. We also use third-party cookies that help us analyze and understand how you use this website. These cookies will be stored in your browser only with your consent. You also have the option to opt-out of these cookies. But opting out of some of these cookies may affect your browsing experience.
Necessary
Always Enabled
Necessary cookies are absolutely essential for the website to function properly. These cookies ensure basic functionalities and security features of the website, anonymously.
CookieDurationDescription
cookielawinfo-checkbox-analytics11 monthsThis cookie is set by GDPR Cookie Consent plugin. The cookie is used to store the user consent for the cookies in the category "Analytics".
cookielawinfo-checkbox-functional11 monthsThe cookie is set by GDPR cookie consent to record the user consent for the cookies in the category "Functional".
cookielawinfo-checkbox-necessary11 monthsThis cookie is set by GDPR Cookie Consent plugin. The cookies is used to store the user consent for the cookies in the category "Necessary".
cookielawinfo-checkbox-others11 monthsThis cookie is set by GDPR Cookie Consent plugin. The cookie is used to store the user consent for the cookies in the category "Other.
cookielawinfo-checkbox-performance11 monthsThis cookie is set by GDPR Cookie Consent plugin. The cookie is used to store the user consent for the cookies in the category "Performance".
viewed_cookie_policy11 monthsThe cookie is set by the GDPR Cookie Consent plugin and is used to store whether or not user has consented to the use of cookies. It does not store any personal data.
Functional
Functional cookies help to perform certain functionalities like sharing the content of the website on social media platforms, collect feedbacks, and other third-party features.
Performance
Performance cookies are used to understand and analyze the key performance indexes of the website which helps in delivering a better user experience for the visitors.
Analytics
Analytical cookies are used to understand how visitors interact with the website. These cookies help provide information on metrics the number of visitors, bounce rate, traffic source, etc.
Advertisement
Advertisement cookies are used to provide visitors with relevant ads and marketing campaigns. These cookies track visitors across websites and collect information to provide customized ads.
Others
Other uncategorized cookies are those that are being analyzed and have not been classified into a category as yet.
SAVE & ACCEPT